Ludvig
commited on
Commit
·
148c712
1
Parent(s):
448553b
Minor refactor and adds lots of design choices (not "connected to api")
Browse files
app.py
CHANGED
|
@@ -23,23 +23,26 @@ from collections import OrderedDict
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from utils import call_subprocess, clean_string_for_non_alphanumerics
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from data import read_data, read_data_cached, DownloadHeader, generate_data
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from text_sections import (
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intro_text,
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columns_text,
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upload_predictions_text,
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upload_counts_text,
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generate_data_text,
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-
design_text,
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enter_count_data_text,
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)
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-
st.markdown(
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<style>
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.small-font {
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font-size:0.85em !important;
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}
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</style>
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-
""",
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# Create temporary directory
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@@ -308,113 +311,11 @@ if st.session_state["step"] >= 2:
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f"Got {num_classes} target classes."
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)
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-
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-
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-
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-
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-
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-
"Select classes (min=2, order is respected)",
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-
options=st.session_state["classes"],
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default=st.session_state["classes"],
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help="Select the classes to create the confusion matrix for. "
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"Any observation with either a target or prediction "
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-
"of another class is excluded.",
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-
)
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-
with col2:
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if (
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st.session_state["input_type"] == "data"
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and predictions_are_probabilities
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):
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prob_of_class = st.selectbox(
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"Probabilities are of (not working)",
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options=st.session_state["classes"],
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index=1,
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)
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else:
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prob_of_class = None
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-
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with st.expander("Advanced"):
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-
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default_elements = [
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"Counts",
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"Normalized Counts (%)",
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"Zero Shading",
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"Arrows",
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]
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if num_classes < 6:
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# Percentages clutter too much with many classes
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default_elements += [
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"Row Percentages",
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"Column Percentages",
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]
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elements_to_add = st.multiselect(
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"Add the following elements",
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options=[
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"Sum Tiles",
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"Counts",
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"Normalized Counts (%)",
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"Row Percentages",
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"Column Percentages",
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"Zero Shading",
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"Zero Percentages",
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"Zero Text",
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"Arrows",
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],
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default=default_elements,
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)
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-
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col1, col2, col3 = st.columns(3)
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with col1:
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counts_on_top = st.checkbox(
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"Counts on top (not working)",
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help="Whether to switch the positions of the counts and normalized counts (%). "
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"That is, the counts become the big centralized numbers and the "
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"normalized counts go below with a smaller font size.",
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)
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with col2:
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diag_percentages_only = st.checkbox("Diagonal row/column percentages only")
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with col3:
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num_digits = st.number_input(
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"Digits", value=2, help="Number of digits to round percentages to."
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)
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-
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element_flags = [
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key
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for key, val in {
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"--add_sums": "Sum Tiles" in elements_to_add,
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"--add_counts": "Counts" in elements_to_add,
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"--add_normalized": "Normalized Counts (%)" in elements_to_add,
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"--add_row_percentages": "Row Percentages" in elements_to_add,
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"--add_col_percentages": "Column Percentages" in elements_to_add,
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"--add_zero_percentages": "Zero Percentages" in elements_to_add,
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"--add_zero_text": "Zero Text" in elements_to_add,
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"--add_zero_shading": "Zero Shading" in elements_to_add,
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"--add_arrows": "Arrows" in elements_to_add,
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"--counts_on_top": counts_on_top,
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"--diag_percentages_only": diag_percentages_only,
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}.items()
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if val
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]
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-
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palette = st.selectbox(
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"Color Palette",
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options=["Blues", "Greens", "Oranges", "Greys", "Purples", "Reds"],
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)
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-
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# Ask for output parameters
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# TODO: Set default based on number of classes and sum tiles
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col1, col2, col3 = st.columns(3)
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with col1:
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width = st.number_input("Width (px)", value=1200 + 100 * (num_classes - 2))
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with col2:
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height = st.number_input(
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"Height (px)", value=1200 + 100 * (num_classes - 2)
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)
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with col3:
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dpi = st.number_input("DPI (not working)", value=320)
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-
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if st.form_submit_button(label="Generate plot"):
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st.session_state["step"] = 3
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if st.session_state["step"] >= 3:
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plotting_args = [
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@@ -427,24 +328,24 @@ if st.session_state["step"] >= 2:
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"--prediction_col",
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f"'{prediction_col}'",
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"--width",
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f"{width}",
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"--height",
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f"{height}",
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"--dpi",
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f"{dpi}",
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"--classes",
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f"{','.join(selected_classes)}",
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"--digits",
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f"{num_digits}",
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"--palette",
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-
f"{palette}",
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]
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if st.session_state["input_type"] == "counts":
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# The input data are counts
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plotting_args += ["--n_col", f"{n_col}", "--data_are_counts"]
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-
plotting_args += element_flags
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plotting_args = " ".join(plotting_args)
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from utils import call_subprocess, clean_string_for_non_alphanumerics
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from data import read_data, read_data_cached, DownloadHeader, generate_data
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+
from design import design_section
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from text_sections import (
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intro_text,
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columns_text,
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upload_predictions_text,
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upload_counts_text,
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generate_data_text,
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enter_count_data_text,
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)
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st.markdown(
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+
"""
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<style>
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.small-font {
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font-size:0.85em !important;
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}
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</style>
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+
""",
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unsafe_allow_html=True,
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)
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# Create temporary directory
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f"Got {num_classes} target classes."
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)
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# Section for specifying design settings
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design_settings = design_section(
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num_classes=num_classes,
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predictions_are_probabilities=predictions_are_probabilities,
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)
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if st.session_state["step"] >= 3:
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plotting_args = [
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"--prediction_col",
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f"'{prediction_col}'",
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"--width",
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+
f"{design_settings['width']}",
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"--height",
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+
f"{design_settings['height']}",
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"--dpi",
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+
f"{design_settings['dpi']}",
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"--classes",
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+
f"{','.join(design_settings['selected_classes'])}",
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"--digits",
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+
f"{design_settings['num_digits']}",
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"--palette",
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+
f"{design_settings['palette']}",
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]
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if st.session_state["input_type"] == "counts":
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# The input data are counts
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plotting_args += ["--n_col", f"{n_col}", "--data_are_counts"]
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+
plotting_args += design_settings["element_flags"]
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plotting_args = " ".join(plotting_args)
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design.py
ADDED
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@@ -0,0 +1,223 @@
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|
| 1 |
+
import streamlit as st
|
| 2 |
+
|
| 3 |
+
from text_sections import (
|
| 4 |
+
design_text,
|
| 5 |
+
)
|
| 6 |
+
|
| 7 |
+
# arrow_size = 0.048,
|
| 8 |
+
# arrow_nudge_from_text = 0.065,
|
| 9 |
+
# sums_settings = sum_tile_settings(),
|
| 10 |
+
# intensity_by
|
| 11 |
+
|
| 12 |
+
# darkness = 0.8
|
| 13 |
+
|
| 14 |
+
|
| 15 |
+
def design_section(
|
| 16 |
+
num_classes,
|
| 17 |
+
predictions_are_probabilities,
|
| 18 |
+
):
|
| 19 |
+
output = {}
|
| 20 |
+
|
| 21 |
+
with st.form(key="settings_form"):
|
| 22 |
+
design_text()
|
| 23 |
+
col1, col2 = st.columns(2)
|
| 24 |
+
with col1:
|
| 25 |
+
output["selected_classes"] = st.multiselect(
|
| 26 |
+
"Select classes (min=2, order is respected)",
|
| 27 |
+
options=st.session_state["classes"],
|
| 28 |
+
default=st.session_state["classes"],
|
| 29 |
+
help="Select the classes to create the confusion matrix for. "
|
| 30 |
+
"Any observation with either a target or prediction "
|
| 31 |
+
"of another class is excluded.",
|
| 32 |
+
)
|
| 33 |
+
with col2:
|
| 34 |
+
if (
|
| 35 |
+
st.session_state["input_type"] == "data"
|
| 36 |
+
and predictions_are_probabilities
|
| 37 |
+
):
|
| 38 |
+
output["prob_of_class"] = st.selectbox(
|
| 39 |
+
"Probabilities are of (not working)",
|
| 40 |
+
options=st.session_state["classes"],
|
| 41 |
+
index=1,
|
| 42 |
+
)
|
| 43 |
+
else:
|
| 44 |
+
output["prob_of_class"] = None
|
| 45 |
+
|
| 46 |
+
with st.expander("Elements"):
|
| 47 |
+
default_elements = [
|
| 48 |
+
"Counts",
|
| 49 |
+
"Normalized Counts (%)",
|
| 50 |
+
"Zero Shading",
|
| 51 |
+
"Arrows",
|
| 52 |
+
]
|
| 53 |
+
if num_classes < 6:
|
| 54 |
+
# Percentages clutter too much with many classes
|
| 55 |
+
default_elements += [
|
| 56 |
+
"Row Percentages",
|
| 57 |
+
"Column Percentages",
|
| 58 |
+
]
|
| 59 |
+
elements_to_add = st.multiselect(
|
| 60 |
+
"Add the following elements",
|
| 61 |
+
options=[
|
| 62 |
+
"Sum Tiles",
|
| 63 |
+
"Counts",
|
| 64 |
+
"Normalized Counts (%)",
|
| 65 |
+
"Row Percentages",
|
| 66 |
+
"Column Percentages",
|
| 67 |
+
"Zero Shading",
|
| 68 |
+
"Zero Percentages",
|
| 69 |
+
"Zero Text",
|
| 70 |
+
"Arrows",
|
| 71 |
+
],
|
| 72 |
+
default=default_elements,
|
| 73 |
+
)
|
| 74 |
+
|
| 75 |
+
st.markdown("""---""")
|
| 76 |
+
|
| 77 |
+
col1, col2, col3 = st.columns(3)
|
| 78 |
+
with col1:
|
| 79 |
+
counts_on_top = st.checkbox(
|
| 80 |
+
"Counts on top (not working)",
|
| 81 |
+
help="Whether to switch the positions of the counts and normalized counts (%). "
|
| 82 |
+
"That is, the counts become the big centralized numbers and the "
|
| 83 |
+
"normalized counts go below with a smaller font size.",
|
| 84 |
+
)
|
| 85 |
+
with col2:
|
| 86 |
+
diag_percentages_only = st.checkbox(
|
| 87 |
+
"Diagonal row/column percentages only"
|
| 88 |
+
)
|
| 89 |
+
|
| 90 |
+
with st.expander("Text"):
|
| 91 |
+
col1, col2, col3 = st.columns(3)
|
| 92 |
+
with col1:
|
| 93 |
+
output["num_digits"] = st.number_input(
|
| 94 |
+
"Digits", value=2, help="Number of digits to round percentages to."
|
| 95 |
+
)
|
| 96 |
+
with col2:
|
| 97 |
+
rotate_y_text = st.checkbox("Rotate y text", value=True)
|
| 98 |
+
with col3:
|
| 99 |
+
place_x_axis_above = st.checkbox("Place X axis on top", value=True)
|
| 100 |
+
|
| 101 |
+
with st.expander("Fonts"):
|
| 102 |
+
font_dicts = {}
|
| 103 |
+
for font_type in ["Counts", "Normalized (%)", "Row Percentage", "Column Percentage"]:
|
| 104 |
+
st.subheader(font_type)
|
| 105 |
+
num_cols = 3
|
| 106 |
+
font_dicts[font_type] = font_inputs(key_prefix=font_type)
|
| 107 |
+
for i, (setting_name, setting_widget) in enumerate(
|
| 108 |
+
font_dicts[font_type].items()
|
| 109 |
+
):
|
| 110 |
+
if i % num_cols == 0:
|
| 111 |
+
cols = st.columns(num_cols)
|
| 112 |
+
with cols[i % num_cols]:
|
| 113 |
+
setting_widget()
|
| 114 |
+
|
| 115 |
+
st.markdown("""---""")
|
| 116 |
+
|
| 117 |
+
with st.expander("Tiles"):
|
| 118 |
+
col1, col2, col3 = st.columns(3)
|
| 119 |
+
with col1:
|
| 120 |
+
pass
|
| 121 |
+
with col2:
|
| 122 |
+
output["intensity_by"] = st.selectbox("Intensity based on", options=["Counts", "Normalized (%)"])
|
| 123 |
+
with col3:
|
| 124 |
+
output["darkness"] = st.slider(
|
| 125 |
+
"Darkness",
|
| 126 |
+
min_value=0.0,
|
| 127 |
+
max_value=1.0,
|
| 128 |
+
value=0.8,
|
| 129 |
+
step=0.01,
|
| 130 |
+
help="How dark the darkest colors should be, between 0 and 1, where 1 is darkest.",
|
| 131 |
+
)
|
| 132 |
+
|
| 133 |
+
st.markdown("""---""")
|
| 134 |
+
|
| 135 |
+
col1, col2, col3, col4 = st.columns(4)
|
| 136 |
+
with col1:
|
| 137 |
+
output["tile_border_add"] = st.checkbox("Add tile borders", value=False)
|
| 138 |
+
with col2:
|
| 139 |
+
output["tile_border_color"] = st.color_picker(
|
| 140 |
+
"Border color", value="#000000"
|
| 141 |
+
)
|
| 142 |
+
with col3:
|
| 143 |
+
output["tile_border_size"] = st.slider(
|
| 144 |
+
"Border size",
|
| 145 |
+
min_value=0.0,
|
| 146 |
+
max_value=3.0,
|
| 147 |
+
value=0.1,
|
| 148 |
+
step=0.01,
|
| 149 |
+
)
|
| 150 |
+
with col4:
|
| 151 |
+
output["tile_border_linetype"] = st.selectbox(
|
| 152 |
+
"Border linetype",
|
| 153 |
+
options=[
|
| 154 |
+
"solid",
|
| 155 |
+
"dashed",
|
| 156 |
+
"dotted",
|
| 157 |
+
"dotdash",
|
| 158 |
+
"longdash",
|
| 159 |
+
"twodash",
|
| 160 |
+
],
|
| 161 |
+
)
|
| 162 |
+
|
| 163 |
+
output["element_flags"] = [
|
| 164 |
+
key
|
| 165 |
+
for key, val in {
|
| 166 |
+
"--add_sums": "Sum Tiles" in elements_to_add,
|
| 167 |
+
"--add_counts": "Counts" in elements_to_add,
|
| 168 |
+
"--add_normalized": "Normalized Counts (%)" in elements_to_add,
|
| 169 |
+
"--add_row_percentages": "Row Percentages" in elements_to_add,
|
| 170 |
+
"--add_col_percentages": "Column Percentages" in elements_to_add,
|
| 171 |
+
"--add_zero_percentages": "Zero Percentages" in elements_to_add,
|
| 172 |
+
"--add_zero_text": "Zero Text" in elements_to_add,
|
| 173 |
+
"--add_zero_shading": "Zero Shading" in elements_to_add,
|
| 174 |
+
"--add_arrows": "Arrows" in elements_to_add,
|
| 175 |
+
"--counts_on_top": counts_on_top,
|
| 176 |
+
"--diag_percentages_only": diag_percentages_only,
|
| 177 |
+
}.items()
|
| 178 |
+
if val
|
| 179 |
+
]
|
| 180 |
+
|
| 181 |
+
output["palette"] = st.selectbox(
|
| 182 |
+
"Color Palette",
|
| 183 |
+
options=["Blues", "Greens", "Oranges", "Greys", "Purples", "Reds"],
|
| 184 |
+
)
|
| 185 |
+
|
| 186 |
+
# Ask for output parameters
|
| 187 |
+
# TODO: Set default based on number of classes and sum tiles
|
| 188 |
+
col1, col2, col3 = st.columns(3)
|
| 189 |
+
with col1:
|
| 190 |
+
output["width"] = st.number_input(
|
| 191 |
+
"Width (px)", value=1200 + 100 * (num_classes - 2)
|
| 192 |
+
)
|
| 193 |
+
with col2:
|
| 194 |
+
output["height"] = st.number_input(
|
| 195 |
+
"Height (px)", value=1200 + 100 * (num_classes - 2)
|
| 196 |
+
)
|
| 197 |
+
with col3:
|
| 198 |
+
output["dpi"] = st.number_input("DPI (not working)", value=320)
|
| 199 |
+
|
| 200 |
+
if st.form_submit_button(label="Generate plot"):
|
| 201 |
+
st.session_state["step"] = 3
|
| 202 |
+
|
| 203 |
+
return output
|
| 204 |
+
|
| 205 |
+
|
| 206 |
+
def font_inputs(key_prefix: str):
|
| 207 |
+
return {
|
| 208 |
+
"color": lambda: st.color_picker("Color", key=f"{key_prefix}_color"),
|
| 209 |
+
"bold": lambda: st.checkbox("Bold", key=f"{key_prefix}_bold"),
|
| 210 |
+
"cursive": lambda: st.checkbox("Italics", key=f"{key_prefix}_italics"),
|
| 211 |
+
"size": lambda: st.number_input("Size", key=f"{key_prefix}_size"),
|
| 212 |
+
"nudge_x": lambda: st.number_input(
|
| 213 |
+
"Nudge on x-axis", key=f"{key_prefix}_nudge_x"
|
| 214 |
+
),
|
| 215 |
+
"nudge_y": lambda: st.number_input(
|
| 216 |
+
"Nudge on y-axis", key=f"{key_prefix}_nudge_y"
|
| 217 |
+
),
|
| 218 |
+
"alpha": lambda: st.slider(
|
| 219 |
+
"Transparency", min_value=0, max_value=1, value=1, key=f"{key_prefix}_alpha"
|
| 220 |
+
),
|
| 221 |
+
"prefix": lambda: st.text_input("Prefix", key=f"{key_prefix}_prefix"),
|
| 222 |
+
"suffix": lambda: st.text_input("Suffix", key=f"{key_prefix}_suffix"),
|
| 223 |
+
}
|