Dockerfile

# Use an official Python runtime as a parent image
FROM python:3.9

# Set the working directory in the container
WORKDIR /usr/src/app

# Install any needed packages specified in requirements.txt
COPY requirements.txt ./
RUN pip install --no-cache-dir -r requirements.txt

# Install BLAST
RUN apt-get update && apt-get install -y ncbi-blast+

# Copy the current directory contents into the container at /usr/src/app
COPY . .

# Set up a new user named "user" with user ID 1000
RUN useradd -m -u 1000 user
# Switch to the "user" user
USER user
# Set home to the user's home directory
ENV HOME=/home/user \\
    PATH=/home/user/.local/bin:$PATH

# Define environment variable
ENV NAME Glydentify

# Run app.py when the container launches
CMD ["python", "app.py", "--host", "0.0.0.0", "--port", "7860"]