Instruct: Given the title of a scientific paper, retrieve paper titles that are cited by the given paper.
Query: A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: a case study in Saccharomyces cerevisiae
Differential expression in RNA-seq: A matter of depth
Transcriptome shifts in response to furfural and acetic acid in Saccharomyces cerevisiae
Understanding the transcriptome through RNA structure
Systematic evaluation of spliced alignment programs for RNA-seq data
A survey of the sorghum transcriptome using single-molecule long reads
Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks
RNA-SeQC: RNA-seq metrics for quality control and process optimization
Gene ontology analysis for RNA-seq: accounting for selection bias
A random variance model for detection of differential gene expression in small microarray experiments
An RNA-Seq based gene expression atlas of the common bean
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
A Robust Method for Transcript Quantification with RNA-Seq Data
RNA sequencing: advances, challenges and opportunities
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
Comparison of Next-Generation Sequencing Systems
iSeeRNA: identification of long intergenic non-coding RNA transcripts from transcriptome sequencing data
Detecting Differential Expression in RNA-sequence Data Using Quasi-likelihood with Shrunken Dispersion Estimates
A custom microarray platform for analysis of microRNA gene expression
RAP: RNA-Seq Analysis Pipeline, a new cloud-based NGS web application
Utilizing RNA-Seq data for de novo coexpression network inference
the five - factor model of personality , work stress and professional quality of life in neonatal intensive care unit nurses .
Exosome-Mediated Small RNA Delivery: A Novel Therapeutic Approach for Inflammatory Lung Responses.
Analysis of users and non-users of smartphone applications
Co-designing accelerators and SoC interfaces using gem5-Aladdin
A scaling normalization method for differential expression analysis of RNA-seq data