Instruct: Given a paper title, retrieve paper titles that are cited by the given paper.
Query: BLAST+: architecture and applications
Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements
Benchmarking spliced alignment programs including Spaln2, an extended version of Spaln that incorporates additional species-specific features
Retrieving Smith-Waterman Alignments with Optimizations for Megabase Biological Sequences Using GPU
An efficient implementation of Smith Waterman algorithm on GPU using CUDA, for massively parallel scanning of sequence databases
Hardware acceleration of BWA-MEM genomic short read mapping for longer read lengths
Neweyes: A System for Comparing Biological Sequences Using the Running Karp-Rabin Greedy String-Tiling Algorithm
BioBench: A Benchmark Suite of Bioinformatics Applications
Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
Implementation of the Smith-Waterman algorithm on a reconfigurable supercomputing platform
An open benchmark suite for evaluating computer architecture on bioinformatics and life science applications
Comparison of Exact String Matching Algorithms for Biological Sequences
Recent developments in the MAFFT multiple sequence alignment program
MSc THESIS Hardware Acceleration of BWA-MEM Genome Mapping Application
A parallel Smith-Waterman algorithm based on divide and conquer
BLIS: A Framework for Rapidly Instantiating BLAS Functionality
IDBA- A Practical Iterative de Bruijn Graph De Novo Assembler
Basic Local Alignment Search Tool
A survey of seeding for sequence alignment
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Exploring Sequence Alignment Algorithms on FPGA-based Heterogeneous Architectures
Haptic experience and the design of drawing interfaces
Optimized marker for template-guided intraoral surgery.
Data-driven Personas: Constructing Archetypal Users with Clickstreams and User Telemetry
The self and social cognition: the role of cortical midline structures and mirror neurons
A greedy algorithm for aligning DNA sequences